Showing all search results for Desulfovibrio vulgaris subsp. vulgaris (strain DP4)

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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Other organisms
 
AF-A1VD65-F1-v4
Protein
Ribosomal RNA small subunit methyltransferase A
Gene
rsmA
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
95.91 (Very High)
Sequence length
268

Pyridoxine 5'-phosphate synthase

Reviewed
Reference proteome
AF-A1VCV9-F1-v4
Protein
Pyridoxine 5'-phosphate synthase
Gene
pdxJ
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
96.4 (Very High)
Sequence length
243
AF-A1VDQ8-F1-v4
Protein
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Gene
ispE
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
89.23 (High)
Sequence length
288

DNA ligase 2

Reviewed
Reference proteome
AF-A1VDM7-F1-v4
Protein
DNA ligase 2
Gene
ligA2
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
80.71 (High)
Sequence length
799

Isoleucine--tRNA ligase

Reviewed
Reference proteome
AF-A1VCU3-F1-v4
Protein
Isoleucine--tRNA ligase
Gene
ileS
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
94.38 (Very High)
Sequence length
940

UvrABC system protein B

Reviewed
Reference proteome
AF-A1VDN0-F1-v4
Protein
UvrABC system protein B
Gene
uvrB
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
88.33 (High)
Sequence length
679

50S ribosomal protein L36

Reviewed
Reference proteome
AF-A1VE94-F1-v4
Protein
50S ribosomal protein L36
Gene
rpmJ
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
95.15 (Very High)
Sequence length
39

30S ribosomal protein S4

Reviewed
Reference proteome
AF-A1VE91-F1-v4
Protein
30S ribosomal protein S4
Gene
rpsD
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
92.88 (Very High)
Sequence length
210

Proline--tRNA ligase

Reviewed
Reference proteome
AF-A1VE74-F1-v4
Protein
Proline--tRNA ligase
Gene
proS
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
95.23 (Very High)
Sequence length
576

6,7-dimethyl-8-ribityllumazine synthase

Reviewed
Reference proteome
AF-A1VEL0-F1-v4
Protein
6,7-dimethyl-8-ribityllumazine synthase
Gene
ribH
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
97.42 (Very High)
Sequence length
158

50S ribosomal protein L21

Reviewed
Reference proteome
AF-A1VF58-F1-v4
Protein
50S ribosomal protein L21
Gene
rplU
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
93.23 (Very High)
Sequence length
104

CTP synthase

Reviewed
Reference proteome
AF-A1VDL2-F1-v4
Protein
CTP synthase
Gene
pyrG
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
94.07 (Very High)
Sequence length
549

Lipoprotein signal peptidase

Reviewed
Reference proteome
AF-A1VCU2-F1-v4
Protein
Lipoprotein signal peptidase
Gene
lspA
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
91.8 (Very High)
Sequence length
167

3-isopropylmalate dehydratase small subunit

Reviewed
Reference proteome
AF-A1VAE6-F1-v4
Protein
3-isopropylmalate dehydratase small subunit
Gene
leuD
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
94.87 (Very High)
Sequence length
169

Acyl carrier protein

Reviewed
Reference proteome
AF-A1VEK3-F1-v4
Protein
Acyl carrier protein
Gene
acpP
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
91.69 (Very High)
Sequence length
78

30S ribosomal protein S18

Reviewed
Reference proteome
AF-A1VF29-F1-v4
Protein
30S ribosomal protein S18
Gene
rpsR
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
86.29 (High)
Sequence length
89

Peptide chain release factor 1

Reviewed
Reference proteome
AF-A1VAK8-F1-v4
Protein
Peptide chain release factor 1
Gene
prfA
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
90.38 (Very High)
Sequence length
359
AF-A1VBV0-F1-v4
Protein
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
Gene
fabZ
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
94 (Very High)
Sequence length
156

Putative regulatory protein Dvul_2085

Reviewed
Reference proteome
AF-A1VF85-F1-v4
Protein
Putative regulatory protein Dvul_2085
Gene
Dvul_2085
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
92.8 (Very High)
Sequence length
88

30S ribosomal protein S10

Reviewed
Reference proteome
AF-A1VEB7-F1-v4
Protein
30S ribosomal protein S10
Gene
rpsJ
Source Organism
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) search this organism
UniProt
Average pLDDT
87.4 (High)
Sequence length
107