Showing all search results for Paracoccus denitrificans (strain Pd 1222)

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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Other organisms
 

Gene transfer agent

Unreviewed
Reference proteome
AF-A1B0R3-F1-v4
Protein
Gene transfer agent
Gene
Pden_0996
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
96.31 (Very High)
Sequence length
137

50S ribosomal protein L27

Reviewed
Reference proteome
AF-A1B9H4-F1-v4
Protein
50S ribosomal protein L27
Gene
rpmA
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
89.7 (High)
Sequence length
92
AF-A1AZ43-F1-v4
Protein
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Gene
ispE
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
94.69 (Very High)
Sequence length
275

Ketol-acid reductoisomerase (NADP(+))

Reviewed
Reference proteome
AF-A1B2W3-F1-v4
Protein
Ketol-acid reductoisomerase (NADP(+))
Gene
ilvC
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
97.3 (Very High)
Sequence length
342

Methionyl-tRNA formyltransferase

Reviewed
Reference proteome
AF-A1AZR0-F1-v4
Protein
Methionyl-tRNA formyltransferase
Gene
fmt
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
96.79 (Very High)
Sequence length
299

S-adenosylmethionine synthase

Reviewed
Reference proteome
AF-A1B374-F1-v4
Protein
S-adenosylmethionine synthase
Gene
metK
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
95.83 (Very High)
Sequence length
390
AF-A1B677-F1-v4
Protein
Macrolide export ATP-binding/permease protein MacB 1/2
Gene
macB1
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
86.77 (High)
Sequence length
670
AF-A1BB78-F1-v4
Protein
Cell division topological specificity factor
Gene
minE
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
80.42 (High)
Sequence length
91

30S ribosomal protein S8

Reviewed
Reference proteome
AF-A1B041-F1-v4
Protein
30S ribosomal protein S8
Gene
rpsH
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
95.69 (Very High)
Sequence length
134
AF-A1B9Q2-F1-v4
Protein
NADPH-dependent 7-cyano-7-deazaguanine reductase
Gene
queF
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
94.25 (Very High)
Sequence length
156
AF-A1B0G5-F1-v4
Protein
4-hydroxythreonine-4-phosphate dehydrogenase
Gene
pdxA
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
96.31 (Very High)
Sequence length
324

tRNA dimethylallyltransferase

Reviewed
Reference proteome
AF-A1B964-F1-v4
Protein
tRNA dimethylallyltransferase
Gene
miaA
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
94.57 (Very High)
Sequence length
304

Aldehyde dehydrogenase

Reviewed
Reference proteome
AF-A1B4L2-F1-v4
Protein
Aldehyde dehydrogenase
Gene
adh
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
97.04 (Very High)
Sequence length
510
AF-A1BCE9-F1-v4
Protein
Macrolide export ATP-binding/permease protein MacB 3
Gene
macB3
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
87.28 (High)
Sequence length
642

50S ribosomal protein L7/L12

Reviewed
Reference proteome
AF-A1B014-F1-v4
Protein
50S ribosomal protein L7/L12
Gene
rplL
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
75.56 (High)
Sequence length
126

Imidazoleglycerol-phosphate dehydratase

Reviewed
Reference proteome
AF-A1B384-F1-v4
Protein
Imidazoleglycerol-phosphate dehydratase
Gene
hisB
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
98.16 (Very High)
Sequence length
197

UPF0173 metal-dependent hydrolase Pden_0574

Reviewed
Reference proteome
AF-A1AZJ2-F1-v4
Protein
UPF0173 metal-dependent hydrolase Pden_0574
Gene
Pden_0574
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
98.13 (Very High)
Sequence length
232

Nitrite reductase

Reviewed
Reference proteome
AF-Q51700-F1-v4
Protein
Nitrite reductase
Gene
nirS
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
94.21 (Very High)
Sequence length
598

Formamidopyrimidine-DNA glycosylase

Reviewed
Reference proteome
AF-A1BAN2-F1-v4
Protein
Formamidopyrimidine-DNA glycosylase
Gene
mutM
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
92.31 (Very High)
Sequence length
283

50S ribosomal protein L1

Reviewed
Reference proteome
AF-A1B012-F1-v4
Protein
50S ribosomal protein L1
Gene
rplA
Source Organism
Paracoccus denitrificans (strain Pd 1222) search this organism
UniProt
Average pLDDT
89.14 (High)
Sequence length
235