Showing all search results for Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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Other organisms
 

Ribose 1,5-bisphosphate isomerase

Reviewed
Reference proteome
AF-O57947-F1-v4
Protein
Ribose 1,5-bisphosphate isomerase
Gene
PH0208
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Experimental structures
13 PDB structures for O57947go to PDBe-KB
Average pLDDT
95.71 (Very High)
Sequence length
326

FAD synthase

Reviewed
Reference proteome
AF-O58466-F1-v4
Protein
FAD synthase
Gene
ribL
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
94.21 (Very High)
Sequence length
150

Nucleoside diphosphate kinase

Reviewed
Reference proteome
AF-O58429-F1-v4
Protein
Nucleoside diphosphate kinase
Gene
ndk
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Experimental structures
6 PDB structures for O58429go to PDBe-KB
Average pLDDT
93.95 (Very High)
Sequence length
159

DNA-directed RNA polymerase subunit P

Reviewed
Reference proteome
AF-O74105-F1-v4
Protein
DNA-directed RNA polymerase subunit P
Gene
rpoP
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
75.48 (High)
Sequence length
51
AF-O58452-F1-v4
Protein
Aspartate carbamoyltransferase regulatory chain
Gene
pyrI
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
92.81 (Very High)
Sequence length
154
AF-O58655-F1-v4
Protein
Translation initiation factor 2 subunit alpha
Gene
eif2a
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Experimental structures
1 PDB structure for O58655go to PDBe-KB
Average pLDDT
92.97 (Very High)
Sequence length
277

tRNA pseudouridine synthase A

Reviewed
Reference proteome
AF-O58941-F1-v4
Protein
tRNA pseudouridine synthase A
Gene
truA
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
96.93 (Very High)
Sequence length
264

Archaeal histone A

Reviewed
Reference proteome
AF-O74098-F1-v4
Protein
Archaeal histone A
Gene
PH1782.1
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Experimental structures
1 PDB structure for O74098go to PDBe-KB
Average pLDDT
96.09 (Very High)
Sequence length
69

30S ribosomal protein S3

Reviewed
Reference proteome
AF-O59424-F1-v4
Protein
30S ribosomal protein S3
Gene
rps3
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
89.86 (High)
Sequence length
212

MEMO1 family protein PH1626

Reviewed
Reference proteome
AF-O59292-F1-v4
Protein
MEMO1 family protein PH1626
Gene
PH1626
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
98.03 (Very High)
Sequence length
293

DNA-directed RNA polymerase subunit H

Reviewed
Reference proteome
AF-O74019-F1-v4
Protein
DNA-directed RNA polymerase subunit H
Gene
rpoH
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
91.12 (Very High)
Sequence length
84

ATP-dependent DNA helicase Hel308

Reviewed
Reference proteome
AF-O59025-F1-v4
Protein
ATP-dependent DNA helicase Hel308
Gene
hel308
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
92.8 (Very High)
Sequence length
717
AF-O57920-F1-v4
Protein
Digeranylgeranylglycerophospholipid reductase
Gene
PH0181
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
94.93 (Very High)
Sequence length
395
AF-O59476-F1-v4
Protein
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS
Gene
tiaS
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
94.22 (Very High)
Sequence length
426

dITP/XTP pyrophosphatase

Reviewed
Reference proteome
AF-O59580-F1-v4
Protein
dITP/XTP pyrophosphatase
Gene
PH1917
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Experimental structures
6 PDB structures for O59580go to PDBe-KB
Average pLDDT
97.08 (Very High)
Sequence length
188
AF-O58114-F1-v4
Protein
Probable cobalamin biosynthesis protein CobD
Gene
cobD
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
96.72 (Very High)
Sequence length
285

Cyclic 2,3-diphosphoglycerate synthetase

Reviewed
Reference proteome
AF-O74083-F1-v4
Protein
Cyclic 2,3-diphosphoglycerate synthetase
Gene
cpgS
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
93.99 (Very High)
Sequence length
437

Archaeal Lon protease

Reviewed
Reference proteome
AF-O58221-F1-v4
Protein
Archaeal Lon protease
Gene
PH0452
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
86.96 (High)
Sequence length
1129

50S ribosomal protein L12

Reviewed
Reference proteome
AF-O57705-F1-v4
Protein
50S ribosomal protein L12
Gene
rpl12
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Experimental structures
3 PDB structures for O57705go to PDBe-KB
Average pLDDT
81.91 (High)
Sequence length
110

UPF0113 protein PH0281

Reviewed
Reference proteome
AF-O58019-F1-v4
Protein
UPF0113 protein PH0281
Gene
PH0281
Source Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) search this organism
UniProt
Average pLDDT
91.05 (Very High)
Sequence length
176