Showing all search results for Shewanella loihica (strain ATCC BAA-1088 / PV-4)

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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UDP-2,3-diacylglucosamine hydrolase

Reviewed
Reference proteome
AF-A3QFY1-F1-v4
Protein
UDP-2,3-diacylglucosamine hydrolase
Gene
lpxH
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
94.64 (Very High)
Sequence length
244

ATP synthase subunit c

Reviewed
Reference proteome
AF-A3QJR5-F1-v4
Protein
ATP synthase subunit c
Gene
atpE
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
93.23 (Very High)
Sequence length
85

30S ribosomal protein S13

Reviewed
Reference proteome
AF-A3Q9A4-F1-v4
Protein
30S ribosomal protein S13
Gene
rpsM
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
91.7 (Very High)
Sequence length
120

tRNA uridine(34) hydroxylase

Reviewed
Reference proteome
AF-A3QDU9-F1-v4
Protein
tRNA uridine(34) hydroxylase
Gene
trhO
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
93.43 (Very High)
Sequence length
328

tRNA pseudouridine synthase B

Reviewed
Reference proteome
AF-A3QGU3-F1-v4
Protein
tRNA pseudouridine synthase B
Gene
truB
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
95.35 (Very High)
Sequence length
317

50S ribosomal protein L21

Reviewed
Reference proteome
AF-A3QB93-F1-v4
Protein
50S ribosomal protein L21
Gene
rplU
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
95.53 (Very High)
Sequence length
105

Na(+)/H(+) antiporter NhaA

Reviewed
Reference proteome
AF-A3QBR5-F1-v4
Protein
Na(+)/H(+) antiporter NhaA
Gene
nhaA
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
89.47 (High)
Sequence length
393

Elongation factor Tu 1

Reviewed
Reference proteome
AF-A3Q968-F1-v4
Protein
Elongation factor Tu 1
Gene
tuf1
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
91.6 (Very High)
Sequence length
396

Xaa-Pro dipeptidase

Reviewed
Reference proteome
AF-A3Q8U5-F1-v4
Protein
Xaa-Pro dipeptidase
Gene
pepQ
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
97.24 (Very High)
Sequence length
442

Ribosome maturation factor RimM

Reviewed
Reference proteome
AF-A3QBT7-F1-v4
Protein
Ribosome maturation factor RimM
Gene
rimM
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
92.1 (Very High)
Sequence length
178

30S ribosomal protein S16

Reviewed
Reference proteome
AF-A3QBT6-F1-v4
Protein
30S ribosomal protein S16
Gene
rpsP
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
96.44 (Very High)
Sequence length
85

Argininosuccinate synthase

Reviewed
Reference proteome
AF-A3Q9C9-F1-v4
Protein
Argininosuccinate synthase
Gene
argG
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
95.16 (Very High)
Sequence length
409
AF-A3QJ17-F1-v4
Protein
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
Gene
menD
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
95.82 (Very High)
Sequence length
569

Ribosome maturation factor RimP

Reviewed
Reference proteome
AF-A3QGU7-F1-v4
Protein
Ribosome maturation factor RimP
Gene
rimP
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
95.85 (Very High)
Sequence length
153

FMN-dependent NADH:quinone oxidoreductase

Reviewed
Reference proteome
AF-A3QIU7-F1-v4
Protein
FMN-dependent NADH:quinone oxidoreductase
Gene
azoR
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
95.63 (Very High)
Sequence length
199

DNA ligase

Reviewed
Reference proteome
AF-A3QFJ5-F1-v4
Protein
DNA ligase
Gene
ligA
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
89.85 (High)
Sequence length
671
AF-A3QF21-F1-v4
Protein
Imidazole glycerol phosphate synthase subunit HisF
Gene
hisF
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
93.96 (Very High)
Sequence length
259

Glycine dehydrogenase (decarboxylating)

Reviewed
Reference proteome
AF-A3QHI0-F1-v4
Protein
Glycine dehydrogenase (decarboxylating)
Gene
gcvP
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
96.88 (Very High)
Sequence length
964

Bifunctional protein FolD

Reviewed
Reference proteome
AF-A3QFX8-F1-v4
Protein
Bifunctional protein FolD
Gene
folD
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
97.01 (Very High)
Sequence length
286

Acetylglutamate kinase

Reviewed
Reference proteome
AF-A3Q9C7-F1-v4
Protein
Acetylglutamate kinase
Gene
argB
Source Organism
Shewanella loihica (strain ATCC BAA-1088 / PV-4) search this organism
UniProt
Average pLDDT
93.03 (Very High)
Sequence length
263