Showing all search results for Shewanella sp. (strain W3-18-1)

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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Other organisms
 

Bacteriophage replication gene A

Unreviewed
Reference proteome
AF-A0A6N3J7A3-F1-v4
Protein
Bacteriophage replication gene A
Gene
Sputw3181_2905
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
A0A6N3J7A3go to UniProt
Average pLDDT
75.38 (High)
Sequence length
747

Invasion gene expression up-regulator, SirB

Unreviewed
Reference proteome
AF-A0A6N3J833-F1-v4
Protein
Invasion gene expression up-regulator, SirB
Gene
Sputw3181_3368
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
A0A6N3J833go to UniProt
Average pLDDT
88.81 (High)
Sequence length
133

Ribonuclease T

Reviewed
Reference proteome
AF-A1RKQ1-F1-v4
Protein
Ribonuclease T
Gene
rnt
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
93.85 (Very High)
Sequence length
225

UPF0060 membrane protein Sputw3181_1172

Reviewed
Reference proteome
AF-A1RH70-F1-v4
Protein
UPF0060 membrane protein Sputw3181_1172
Gene
Sputw3181_1172
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
94.5 (Very High)
Sequence length
110

N-succinylarginine dihydrolase

Reviewed
Reference proteome
AF-A1RIU9-F1-v4
Protein
N-succinylarginine dihydrolase
Gene
astB
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
97.1 (Very High)
Sequence length
446
AF-A1RMV0-F1-v4
Protein
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
Gene
apaH
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
96.2 (Very High)
Sequence length
276

DNA mismatch repair protein MutH

Reviewed
Reference proteome
AF-A1RME5-F1-v4
Protein
DNA mismatch repair protein MutH
Gene
mutH
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
93.93 (Very High)
Sequence length
225

Nucleoid-associated protein Sputw3181_1707

Reviewed
Reference proteome
AF-A1RIP9-F1-v4
Protein
Nucleoid-associated protein Sputw3181_1707
Gene
Sputw3181_1707
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
87.69 (High)
Sequence length
111

Serine--tRNA ligase

Reviewed
Reference proteome
AF-A1RJJ4-F1-v4
Protein
Serine--tRNA ligase
Gene
serS
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
96.28 (Very High)
Sequence length
430
AF-A1RJ17-F1-v4
Protein
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Gene
hisA
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
95.27 (Very High)
Sequence length
247

Probable alpha-L-glutamate ligase 2

Reviewed
Reference proteome
AF-A1RJ58-F1-v4
Protein
Probable alpha-L-glutamate ligase 2
Gene
rimK2
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
92.48 (Very High)
Sequence length
303

Uridine kinase

Reviewed
Reference proteome
AF-A1RIY2-F1-v4
Protein
Uridine kinase
Gene
udk
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
95.42 (Very High)
Sequence length
214

30S ribosomal protein S16

Reviewed
Reference proteome
AF-A1RMB8-F1-v4
Protein
30S ribosomal protein S16
Gene
rpsP
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
96.02 (Very High)
Sequence length
85

30S ribosomal protein S15

Reviewed
Reference proteome
AF-A1RGX8-F1-v4
Protein
30S ribosomal protein S15
Gene
rpsO
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
94.13 (Very High)
Sequence length
91

Na(+)/H(+) antiporter NhaA

Reviewed
Reference proteome
AF-A1RMD9-F1-v4
Protein
Na(+)/H(+) antiporter NhaA
Gene
nhaA
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
89.68 (High)
Sequence length
391
AF-A1RNU4-F1-v4
Protein
N-succinylglutamate 5-semialdehyde dehydrogenase
Gene
astD
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
97.85 (Very High)
Sequence length
488

ATP synthase subunit a

Reviewed
Reference proteome
AF-A1RQB6-F1-v4
Protein
ATP synthase subunit a
Gene
atpB
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
58.14 (Low)
Sequence length
275

50S ribosomal protein L22

Reviewed
Reference proteome
AF-A1REB9-F1-v4
Protein
50S ribosomal protein L22
Gene
rplV
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
96.13 (Very High)
Sequence length
112

Xaa-Pro dipeptidase

Reviewed
Reference proteome
AF-A1RDW7-F1-v4
Protein
Xaa-Pro dipeptidase
Gene
pepQ
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
97.2 (Very High)
Sequence length
442

50S ribosomal protein L10

Reviewed
Reference proteome
AF-A1REA5-F1-v4
Protein
50S ribosomal protein L10
Gene
rplJ
Source Organism
Shewanella sp. (strain W3-18-1) search this organism
UniProt
Average pLDDT
65.94 (Low)
Sequence length
168