Showing all search results for Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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Other organisms
 

DNA-directed RNA polymerase subunit D

Reviewed
Reference proteome
AF-Q5JJF4-F1-v4
Protein
DNA-directed RNA polymerase subunit D
Gene
rpoD
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Experimental structures
7 PDB structures for Q5JJF4go to PDBe-KB
Average pLDDT
96.66 (Very High)
Sequence length
261

L-threonine 3-dehydrogenase

Reviewed
Reference proteome
AF-Q5JI69-F1-v4
Protein
L-threonine 3-dehydrogenase
Gene
tdh
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Experimental structures
1 PDB structure for Q5JI69go to PDBe-KB
Average pLDDT
97.81 (Very High)
Sequence length
352

UPF0128 protein TK2294

Reviewed
Reference proteome
AF-Q5JDC5-F1-v4
Protein
UPF0128 protein TK2294
Gene
TK2294
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
94.4 (Very High)
Sequence length
224

Triosephosphate isomerase

Reviewed
Reference proteome
AF-Q5JHG3-F1-v4
Protein
Triosephosphate isomerase
Gene
tpiA
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
96.92 (Very High)
Sequence length
228

Glutamate dehydrogenase

Reviewed
Reference proteome
AF-O59650-F1-v4
Protein
Glutamate dehydrogenase
Gene
gdhA
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
97.06 (Very High)
Sequence length
423

50S ribosomal protein L14e

Reviewed
Reference proteome
AF-Q5JJE4-F1-v4
Protein
50S ribosomal protein L14e
Gene
rpl14e
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Experimental structures
3 PDB structures for Q5JJE4go to PDBe-KB
Average pLDDT
78.9 (High)
Sequence length
85

Transcription initiation factor IIB 1

Reviewed
Reference proteome
AF-Q5JGN1-F1-v4
Protein
Transcription initiation factor IIB 1
Gene
tfb1
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
91.14 (Very High)
Sequence length
302

Translation initiation factor 1A

Reviewed
Reference proteome
AF-Q5JH78-F1-v4
Protein
Translation initiation factor 1A
Gene
eif1a
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
87.36 (High)
Sequence length
119

NAD-dependent protein deacylase

Reviewed
Reference proteome
AF-Q5JG47-F1-v4
Protein
NAD-dependent protein deacylase
Gene
cobB
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
94.92 (Very High)
Sequence length
259

Probable RNA 2'-phosphotransferase

Reviewed
Reference proteome
AF-Q5JFX3-F1-v4
Protein
Probable RNA 2'-phosphotransferase
Gene
kptA
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
95.99 (Very High)
Sequence length
182

Dihydroorotase

Reviewed
Reference proteome
AF-Q5JJ91-F1-v4
Protein
Dihydroorotase
Gene
pyrC
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
96.95 (Very High)
Sequence length
411

50S ribosomal protein L1

Reviewed
Reference proteome
AF-Q5JH35-F1-v4
Protein
50S ribosomal protein L1
Gene
rpl1
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
88.82 (High)
Sequence length
218

Molybdate/tungstate-binding protein WtpA

Reviewed
Reference proteome
AF-Q5JEB6-F1-v4
Protein
Molybdate/tungstate-binding protein WtpA
Gene
wtpA
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
91.75 (Very High)
Sequence length
356

50S ribosomal protein L15e

Reviewed
Reference proteome
AF-Q5JH43-F1-v4
Protein
50S ribosomal protein L15e
Gene
rpl15e
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Experimental structures
3 PDB structures for Q5JH43go to PDBe-KB
Average pLDDT
94.64 (Very High)
Sequence length
196
AF-Q5JFL8-F1-v4
Protein
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
Gene
purP
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
95.53 (Very High)
Sequence length
333

Tryptophan synthase alpha chain

Reviewed
Reference proteome
AF-Q9YGA9-F1-v4
Protein
Tryptophan synthase alpha chain
Gene
trpA
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
94.58 (Very High)
Sequence length
253

Diphthine synthase

Reviewed
Reference proteome
AF-Q5JFE7-F1-v4
Protein
Diphthine synthase
Gene
dphB
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
96.92 (Very High)
Sequence length
266

DNA primase large subunit PriL

Reviewed
Reference proteome
AF-Q5JJ73-F1-v4
Protein
DNA primase large subunit PriL
Gene
priL
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
90.85 (Very High)
Sequence length
402

Tk-subtilisin

Reviewed
Reference proteome
AF-P58502-F1-v4
Protein
Tk-subtilisin
Gene
TK1675
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Experimental structures
28 PDB structures for P58502go to PDBe-KB
Average pLDDT
93.87 (Very High)
Sequence length
424

Aspartate carbamoyltransferase

Reviewed
Reference proteome
AF-Q5JHM9-F1-v4
Protein
Aspartate carbamoyltransferase
Gene
pyrB
Source Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) search this organism
UniProt
Average pLDDT
95.39 (Very High)
Sequence length
312