Showing all search results for Yersinia ruckeri

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Status Review
This status indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not. In other words, if the entry belongs to the Swiss-Prot section of UniProtKB (reviewed) or to the computer-annotated TrEMBL section (unreviewed).
Reference proteome
Average pLDDT
score
pLDDT is a per-residue measure of local confidence, scaled from 0 to 100. Higher scores indicate higher confidence and usually a more accurate prediction.
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Gene D protein

Unreviewed
Reference proteome
AF-A0A085U800-F1-v4
Protein
Gene D protein
Gene
gpD
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A085U800go to UniProt
Average pLDDT
74.5 (High)
Sequence length
177

gene II and X proteins

Unreviewed
Reference proteome
AF-A0A0A8VK10-F1-v4
Protein
gene II and X proteins
Gene
CSF007_14845
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A0A8VK10go to UniProt
Average pLDDT
84.81 (High)
Sequence length
144
AF-Q93ED4-F1-v4
Protein
3-phosphoshikimate 1-carboxyvinyltransferase
Gene
aroA
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
97.04 (Very High)
Sequence length
429
AF-O87971-F1-v4
Protein
Transcriptional activator protein YukR
Gene
yukR
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
85.67 (High)
Sequence length
231
AF-O87970-F1-v4
Protein
Acyl-homoserine-lactone synthase
Gene
yukI
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
94.41 (Very High)
Sequence length
218
AF-Q8VLP6-F1-v4
Protein
Alkaline proteinase inhibitor
Gene
inh
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
90.69 (Very High)
Sequence length
126
AF-C8BKB7-F1-v4
Protein
Flagellar basal body rod protein FlgB
Gene
flgB
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
86.92 (High)
Sequence length
139
AF-A0A085U3J8-F1-v4
Protein
Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters
Gene
CSF007_17500
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A085U3J8go to UniProt
Average pLDDT
90.69 (Very High)
Sequence length
110
AF-A0A085U677-F1-v4
Protein
DNA damage-inducible gene in SOS regulon,dependent on cyclic AMP and H-NS
Gene
CSF007_10110
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A085U677go to UniProt
Average pLDDT
61.22 (Low)
Sequence length
109

Catabolite activator protein

Unreviewed
Reference proteome
AF-Q5UCH3-F1-v4
Protein
Catabolite activator protein
Gene
crp
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
93.56 (Very High)
Sequence length
212

HTH-type transcriptional regulator MetR

Unreviewed
Reference proteome
AF-A0A085U6L4-F1-v4
Protein
HTH-type transcriptional regulator MetR
Gene
metR
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A085U6L4go to UniProt
Average pLDDT
86.56 (High)
Sequence length
319

Penicillin-binding protein activator LpoA

Unreviewed
Reference proteome
AF-A0A380QRF4-F1-v4
Protein
Penicillin-binding protein activator LpoA
Gene
lpoA
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A380QRF4go to UniProt
Average pLDDT
79.94 (High)
Sequence length
658

Putative type IV pilus protein

Unreviewed
Reference proteome
AF-A0A0A8V876-F1-v4
Protein
Putative type IV pilus protein
Gene
NCTC10476_03633
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A0A8V876go to UniProt
Average pLDDT
71.56 (High)
Sequence length
197

N-formylglutamate deformylase

Unreviewed
Reference proteome
AF-A0A0A8VG24-F1-v4
Protein
N-formylglutamate deformylase
Gene
hutG
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A0A8VG24go to UniProt
Average pLDDT
95.75 (Very High)
Sequence length
273

Antitoxin ParD

Unreviewed
Reference proteome
AF-A0A380SA85-F1-v4
Protein
Antitoxin ParD
Gene
parD1_2
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A380SA85go to UniProt
Average pLDDT
93.56 (Very High)
Sequence length
82

tRNA pseudouridine synthase D

Unreviewed
Reference proteome
AF-A0A085U3A0-F1-v4
Protein
tRNA pseudouridine synthase D
Gene
truD
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A085U3A0go to UniProt
Average pLDDT
94.25 (Very High)
Sequence length
351

DSBA-like thioredoxin domain protein

Unreviewed
Reference proteome
AF-A4IU42-F1-v4
Protein
DSBA-like thioredoxin domain protein
Gene
YR71pYR1_0014
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
83.88 (High)
Sequence length
288

Isochorismate synthase MenF

Unreviewed
Reference proteome
AF-A0A0A5FJV5-F1-v4
Protein
Isochorismate synthase MenF
Gene
menF
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A0A5FJV5go to UniProt
Average pLDDT
93.31 (Very High)
Sequence length
448

Signal peptide peptidase SppA domain protein

Unreviewed
Reference proteome
AF-A4IU41-F1-v4
Protein
Signal peptide peptidase SppA domain protein
Gene
YR71pYR1_0013
Source Organism
Yersinia ruckeri search this organism
UniProt
Average pLDDT
85.31 (High)
Sequence length
327

Arginine:agmatin antiporter

Unreviewed
Reference proteome
AF-A0A380QMN8-F1-v4
Protein
Arginine:agmatin antiporter
Gene
adiC_1
Source Organism
Yersinia ruckeri search this organism
UniProt
A0A380QMN8go to UniProt
Average pLDDT
94.38 (Very High)
Sequence length
446